PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.6G041300.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 381aa    MW: 40337.7 Da    PI: 12.3865
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.6G041300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.25.7e-1182123341
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
              bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                         ++k +rr+++NReAAr+sR+RKka+i++Le+   k ++Le+e
  Sevir.6G041300.1.p  82 RDKTQRRLAQNREAARKSRLRKKAYIQNLETsrlKLAQLEQE 123
                         79****************************833344555544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.6E-879134No hitNo description
SMARTSM003380.002780140IPR004827Basic-leucine zipper domain
PfamPF001704.0E-882123IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.03682124IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.21E-684132No hitNo description
PROSITE patternPS00036087102IPR004827Basic-leucine zipper domain
PROSITE patternPS000360156171IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MGIYERQRHM VAAGLWGEPF RPDGDAFVAP LAAAAPVTGV AVDVVVETEA KFALQAQDEA  60
VPPVEEVAPS SDSFGHDDAR PRDKTQRRLA QNREAARKSR LRKKAYIQNL ETSRLKLAQL  120
EQELTMARRQ QVQLRIIQES KHIAGTPARR PIANRRCHCR NSAAAGTRRR RSRVPRATRG  180
PARDGVRAGV RAVGGGAEEA GRGAARCAAV GRAGAPAAAP RRRRGGALRR ALRRQVARRP  240
RGRRLRALRR VARPRRALLP LDRRVPALGA PPGPGAAAGP AGGAAGVGGA RAAEHGEAAG  300
GRAVAGYEQA AADARRRAPD RRRAGRRRRV RGAADGQRGR QARRPRQLRG PGGSSPAADA  360
AEHEQDPDAA AGGAGAPGAR *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1314328RRRAPDRRRAGRRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP5929022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.15e-20bZIP family protein